BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A01LP1|AL428816
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1717 0.0
>3x_Contig1664
Length = 15696
Score = 1717 bits (866), Expect = 0.0
Identities = 866/866 (100%)
Strand = Plus / Plus
Query: 12 acaactgttgcatattttgccagtattgctctcttaggaattgcagcaagtagaccaaga 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10447 acaactgttgcatattttgccagtattgctctcttaggaattgcagcaagtagaccaaga 10506
Query: 72 gatacatcagacagccgcatgcataaaggtttgtcaacaacttactttgactctgttgta 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10507 gatacatcagacagccgcatgcataaaggtttgtcaacaacttactttgactctgttgta 10566
Query: 132 tttttaactttctttttactcatcggccgtttgttggagagtcttgctaagactaaaaca 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10567 tttttaactttctttttactcatcggccgtttgttggagagtcttgctaagactaaaaca 10626
Query: 192 gcatcagctattagtaatttgagctcatttaagcaagaaacagccaccttgatgcagaaa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10627 gcatcagctattagtaatttgagctcatttaagcaagaaacagccaccttgatgcagaaa 10686
Query: 252 gtgggcgaccaataccaagaagttgaaactgtgcaaatccaatatttggaactcggagac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10687 gtgggcgaccaataccaagaagttgaaactgtgcaaatccaatatttggaactcggagac 10746
Query: 312 tacatcaaaatatctcctggccaatctcctcctttagattcaatcatactcgaaggtgag 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10747 tacatcaaaatatctcctggccaatctcctcctttagattcaatcatactcgaaggtgag 10806
Query: 372 accgagtttgacgaaagtgccttaactggtgaatccattccaatggtgaggttaagggga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10807 accgagtttgacgaaagtgccttaactggtgaatccattccaatggtgaggttaagggga 10866
Query: 432 gatcagatttttgctggtaccgttaatgtcggttctagttcggttattgctaaagtatca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10867 gatcagatttttgctggtaccgttaatgtcggttctagttcggttattgctaaagtatca 10926
Query: 492 tcttttgatggtgaatctttgcttgatcaaatcgtaaatactgtgcgggacggtcaattg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10927 tcttttgatggtgaatctttgcttgatcaaatcgtaaatactgtgcgggacggtcaattg 10986
Query: 552 aatcgtgcccctatcgaacgtctagcagatattttaacaggatactttgttcctattatc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10987 aatcgtgcccctatcgaacgtctagcagatattttaacaggatactttgttcctattatc 11046
Query: 612 atattcttagctattttgacatgggttgtttggttgtcacttggcttatctggaaaactt 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11047 atattcttagctattttgacatgggttgtttggttgtcacttggcttatctggaaaactt 11106
Query: 672 ccagagcactatttagacaccgacatcggtggatggcccgtatggtcattggagtttgct 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11107 ccagagcactatttagacaccgacatcggtggatggcccgtatggtcattggagtttgct 11166
Query: 732 atttcagtgtttgtcattgcatgtccgtgcggcatcggtcttgctgcgccgactgctcta 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11167 atttcagtgtttgtcattgcatgtccgtgcggcatcggtcttgctgcgccgactgctcta 11226
Query: 792 tttgttgggtctggtatggctgccaaatttggtattctatgtcgtggtggtggtgccgca 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11227 tttgttgggtctggtatggctgccaaatttggtattctatgtcgtggtggtggtgccgca 11286
Query: 852 ttccaggaaggttgcaaaattgcaat 877
||||||||||||||||||||||||||
Sbjct: 11287 ttccaggaaggttgcaaaattgcaat 11312
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5878
Number of Sequences: 1807
Number of extensions: 5878
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)